The following blogs posts describe the creation of a Custom Configuration for MicroStation, they should be read in conjunction with the wikis in the second list:
CONNECT Edition - Custom Configuration - Part 1 : Initial Creation Steps
CONNECT Edition - Custom Configuration - Part 2 : Standards Folders
CONNECT Edition - Custom Configuration - Part 3 : Standards CFG Files
CONNECT Edition - Custom Configuration - Part 4 : Standards CFG File Contents
CONNECT Edition - Custom Configuration - Part 5 : Separating Project Data from Standards
Additional steps required for AECOsim Building Designer are described in the wikis
CONNECT Edition - Create Organization folders
CONNECT Edition - Create a new WorkSpace
CONNECT Edition - Create a new WorkSet template
CONNECT Edition - Create a new WorkSet