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When deleting a folder you might get an Error 41 saying it cannot be deleted, this usually means it’s not empty even though it appears to be empty in ProjectWise Explorer.
Please add a folder id column in the view you have(view choose columns…/folder columns->folder id)
The it should show the number of the folder that you are having trouble with in this collumns, please go to your servers storage location and check this folder out, mostl likely find atleast one file that was left there.