Ram SS Large Nodal Displacement

I have a 2 story building where the lower portion of the floor plan must cantilever out due to existing conditions.  I modeled the cantilever using a combination of gravity extensions and stubs as shown in the floor plans.  When I run RAM SS and go through the Frame module I am getting large nodal displacements on the order of between 500 and 2000 inches in the gravity load cases.  The building behaves normally under wind and seismic so I must be missing something with the cantilever.  Should I fix the base of these columns?