joining master string

You can't join 2 master string directly, maybe you can merge both alignment input file into 1 alignment.

I created this avi 7 years back, you can try this method or maybe Bentley can give you faster and easier way.

Thank you

Kugan

Sir Can you share the input file to join two master alignment. My email id :-reddykrishna64@gmail.com

There is no input file to 'magically' merge two alignments. Kugan's suggestion is to take (if you have them) two HALGN files - one for each alignment - and basically put all the options together in a third file to create a new 'merged' alignment. (Kugan - correct me if I have misunderstood your post.)

Hi Mark,

Yes, you're correct. I merged both MC using HALGN and edit to add the X,Y by copy&paste.