Problem:
I have an alignment file referenced into a container file. When I open the profile view of the referenced alignment, I do not see the alignment. I open the Level Display dialog and select the referenced alignment file. I notice that only the Default level is selected as turned on. None of my other Levels are turned on as seen below. How do I have them turn on without having to manually select them every time?
Answer:
There could be two things causing this.